| Property |
Value |
| Working Groups |
RG Kusch, 
RG Moser |
| Subproject |
A04, B01 |
| Open Access |
Yes |
| Publication Type |
Preprint |
| Peer Reviewed |
No |
| DOI |
10.1101/2025.11.16.688700 |
| Publication Year |
2025 |
| Title |
CochleaNet: deep learning-based image analysis for cochlear connectomics and gene therapy |
| Journal |
bioRxiv |
| ISSN |
no ISSN (NLM ID:101680187) |
| URL |
https://doi.org/10.1101/2025.11.16.688700 |
| Journal Abbreviation |
bioRxiv |
| Extra |
Not yet finally published in a peer-reviewed journal |
| Authors |
Roos L, Diniz AM, Koert E, Schilling M, Uhl M, Thirumalai A, Aakhte M, Kusch K, Huisken J, Moser T, Pape C |
| First Author |
Roos L |
| Last Author |
Pape C |
External Resources
biorxiv....ll.pdfhttps://www.biorxiv.org/content/10.1101/2025.11.16.688700v1.full.pdf Article fulltext
10047https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10047 NCBI taxonomy (Mongolian gerbil, Meriones unguiculatus)
10090https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10090 NCBI taxonomy (mouse, Mus musculus)
0009-0007-8051-7964https://orcid.org/0009-0007-8051-7964 ORCID identifier (Lennart Roos)
0009-0002-5372-8639https://orcid.org/0009-0002-5372-8639 ORCID identifier (Aleyna Mirac Diniz)
0000-0001-8040-9444https://orcid.org/0000-0001-8040-9444 ORCID identifier (Elisabeth Koert)
0000-0003-3639-3187https://orcid.org/0000-0003-3639-3187 ORCID identifier (Martin Schilling)
0009-0009-4340-1422https://orcid.org/0009-0009-4340-1422 ORCID identifier (Mara Uhl)
0000-0002-3624-0343https://orcid.org/0000-0002-3624-0343 ORCID identifier (Anupriya Thirumalai)
0000-0003-4685-5576https://orcid.org/0000-0003-4685-5576 ORCID identifier (Mostafa Aakhte)
0000-0002-5079-502Xhttps://orcid.org/0000-0002-5079-502X ORCID identifier (Kathrin Kusch)
0000-0001-7250-3756https://orcid.org/0000-0001-7250-3756 ORCID identifier (Jan Huisken)
0000-0001-7145-0533https://orcid.org/0000-0001-7145-0533 ORCID identifier (Tobias Moser)
0000-0001-6562-7187https://orcid.org/0000-0001-6562-7187 ORCID identifier (Constantin Pape)
8https://rdp.ekfz.uni-goettingen.de/literature/publication/8 Published Data Registry entry (EKFZ)
1/641https://mbexc.uni-goettingen.de/archive/1/641 Research Data Archive MBExC (supplemental material)
1280https://prod.mbexc.uni-goettingen.de/literature/publications/1280 Published Data Registry entry (MBExC)
SCR_007370https://scicrunch.org/resolver/SCR_007370 SciCrunch identifier (RRID:SCR_007370, Imaris)
SCR_018536https://scicrunch.org/resolver/SCR_018536 SciCrunch identifier (RRID:SCR_018536, PyTorch)
SCR_008394https://scicrunch.org/resolver/SCR_008394 SciCrunch identifier (RRID:SCR_008394, Python)
SCR_021716https://scicrunch.org/resolver/SCR_021716 SciCrunch identifier (RRID:SCR_021716, Cellpose)
02f99v835https://ror.org/02f99v835 ROR identifier (02f99v835, German Primate Center)
03av75f26https://ror.org/03av75f26 ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
05xy1nn52https://ror.org/05xy1nn52 ROR identifier (05xy1nn52, Multiscale Bioimaging)
021ft0n22https://ror.org/021ft0n22 ROR identifier (021ft0n22, University Medical Center Göttingen)
01y9bpm73https://ror.org/01y9bpm73 ROR identifier (01y9bpm73, University of Göttingen)
github.c...ea-nethttps://github.com/computational-cell-analytics/cochlea-net Supplemental material (code)
computat...a-net/https://computational-cell-analytics.github.io/cochlea-net/ Supplemental material (code)